CDS

Accession Number TCMCG057C56457
gbkey CDS
Protein Id XP_018462574.1
Location complement(join(1311..1409,1498..1554,1804..1929,2242..2376,2486..2557,2653..2712,2804..3184))
Gene LOC108833660
GeneID 108833660
Organism Raphanus sativus

Protein

Length 309aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018607072.1
Definition PREDICTED: beta-carotene 3-hydroxylase 1, chloroplastic-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description Belongs to the sterol desaturase family
KEGG_TC -
KEGG_Module M00372        [VIEW IN KEGG]
KEGG_Reaction R07530        [VIEW IN KEGG]
R07558        [VIEW IN KEGG]
R07559        [VIEW IN KEGG]
R07561        [VIEW IN KEGG]
R07562        [VIEW IN KEGG]
R07568        [VIEW IN KEGG]
R07569        [VIEW IN KEGG]
R07570        [VIEW IN KEGG]
R07572        [VIEW IN KEGG]
R07851        [VIEW IN KEGG]
R09747        [VIEW IN KEGG]
KEGG_rclass RC00478        [VIEW IN KEGG]
RC00704        [VIEW IN KEGG]
RC02629        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K15746        [VIEW IN KEGG]
EC 1.14.15.24        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016122        [VIEW IN EMBL-EBI]
GO:0016123        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCAGGTCTCTCAACAGCCCTTACATTCAAACCTCTCCACCGCGCTTTCTCTTCCTCCAGTCTCCGCCTGCACCATCCAACATCCTTAACCGGATTCCCGTCGTCTCTCCTCCGGTTCAGAGGATTATCCGTCTGCTACGTCGTCTCGGATCGGAGGCAGAGCTCTCCTATCGACAAAGATGACAGTCCTCCCGAGACTACGGAGCCAACAACAACAGCCATAGACGCGGAGTACCTGGCGCTGCGTTTAGCTGAGAAGCTGGAGCGGAAGAAATCGGAGAGGTTCACTTATCTGATTGCTGCAGTGATGTCGAGCTTCGGTATCACTTCGATGGCTATTATGGCCGTTTACTACAGATTCTCTTGGCAGATGGAGGGAGGTGAAATCCCAATGTCGGAGATGTTCGGTACATTTGCTCTCTCTGTTGGTGCTGCTGTTGGCATGGAGTTCTGGGCAAGATGGGCTCATAAAGCTCTCTGGCACGCTTCTTTATGGAACATGCATGAGTCACATCACAAACCTAGAGAAGGGCCGTTTGAGTTGAACGATGTGTTCGCCATAATCAACGCTGTTCCTGCCATTGCTCTCCTCTCTTACGGTTTCTTCAATAAGGGACTCGTTCCTGGCCTCTGCTTTGGCGCTGGGTTAGGAATAACAGTGTTTGGAATCGCCTACATGTTCGTCCACGATGGTTTGGTGCACAAGCGCTTCCCTGTAGGTCCCATCGCTGACGTTCCTTATCTCCGAAGGGTCGCCGCTGCTCACCAGCTGCATCACACAGACAAATTCGATGGTGTGCCATATGGGCTGTTTCTTGGACCGAAGGAATTGGAGGAAGTTGGAGGAGATGAAGAGTTAGAGAAAGAGATAAGTCGGAGAATCAAACTGTACAAAAGGGGGTCTGGTTCCGGGTCGACTTCTTGA
Protein:  
MAAGLSTALTFKPLHRAFSSSSLRLHHPTSLTGFPSSLLRFRGLSVCYVVSDRRQSSPIDKDDSPPETTEPTTTAIDAEYLALRLAEKLERKKSERFTYLIAAVMSSFGITSMAIMAVYYRFSWQMEGGEIPMSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWNMHESHHKPREGPFELNDVFAIINAVPAIALLSYGFFNKGLVPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIADVPYLRRVAAAHQLHHTDKFDGVPYGLFLGPKELEEVGGDEELEKEISRRIKLYKRGSGSGSTS